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[AutoDiff] Autodiff 1: Add baseline adstack regression test for unary_collections#500

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@duburcqa duburcqa commented Apr 17, 2026

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Baseline adstack regression test for unary_collections

Test-only PR. Pins reverse-mode AD through a dynamic loop over every unary op currently in NonLinearOps::unary_collections, cross-checked against PyTorch autograd in both f32 and f64.

TL;DR

@qd.kernel
def compute():
    for i in x:
        acc = 0.0
        for j in range(n_iter):
            a = x[i] + qd.cast(j, qd_dtype) * step + offset
            acc += qd_op(a)
        y[None] += acc

a is rebuilt from scratch every iteration of the inner dynamic range-for, so the reverse pass cannot reuse a single BackupSSA-spilled copy — it has to walk the adstack. Any nonlinear unary op dropped from unary_collections causes the multi-iteration variants (n_iter >= 3) to fail with gradients off by large factors; single-iteration variants happen to pass even without promotion, which is noted in the comment.

Why

The existing reverse-mode AD tests in test_ad_*.py exercise the formulas, not the per-iteration spill path. The bug class that motivates this PR is a unary op silently not being in NonLinearOps::unary_collections (the set that drives AdStackAllocaJudger's decision to promote the operand alloca): without promotion, BackupSSA spills the operand to a single plain alloca that every forward iteration overwrites, so every backward step reads the last-iteration value. Gradients come out silently wrong at n_iter >= 3.

Pinning this explicitly with a per-op parametrize means (a) every op currently in unary_collections has a failing-case regression, and (b) subsequent PRs in the chain get a ready-made slot to drop new ops into.

Surface

Single new test file: tests/python/test_adstack.py.

  • Module-level _UNARY_OPS_PARAMS tuple: (op_name, step, offset) per op, grouped by domain (real / positive-subunit) with comments explaining the (step, offset) choices.
  • _run_unary_loop_carried(qd_dtype, op_name, step, offset, x_val, n_iter, rel_tol) helper: builds the kernel, runs forward + backward, compares against a PyTorch reference in the matching dtype.
  • test_adstack_unary_loop_carried — f32, rel=1e-4, decorated with require=qd.extension.adstack.
  • test_adstack_unary_loop_carried_f64 — f64, rel=1e-12, decorated with require=[qd.extension.adstack, qd.extension.data64], default_fp=qd.f64.

Both iterate the same _UNARY_OPS_PARAMS × x_val ∈ {0.001, 0.15, 0.26, 0.399} × n_iter ∈ {1, 3, 10} matrix. 0.26 (rather than 0.25) avoids x[3] + offset = 0 at j=0, where abs's derivative is undefined. abs/sin/cos use a (step, offset) that makes the operand cross zero across iterations so their gradient signs actually vary (otherwise they'd pass even if dropped from the set).

Why two separate tests instead of parametrizing dtype

qd.cast(py_float_literal, qd.f64) bakes the literal at default_fp first, then casts to f64 — so qd.cast(0.3, qd.f64) is not bit-equal to IEEE-754 0.3. The only way to get truly tight (~1e-12) f64 tolerance is to decorate the test with default_fp=qd.f64 so the frontend treats Python floats as f64 from the start. That forces the two tests to be separate at the decorator level; the shared body lives in _run_unary_loop_carried.

Tests

All parametrize entries pass across arm64 / Metal / Vulkan (local) and x86_64 / AMDGPU / Vulkan (amdgpu).

Stack

Autodiff 1 of 13. Followed by #501 (tan).

@hughperkins hughperkins changed the title [AutoDiff] Add baseline adstack regression test for unary_collections [AutoDiff] Adstack 1: Add baseline adstack regression test for unary_collections Apr 17, 2026
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@claude review

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@codex review

@hughperkins hughperkins changed the title [AutoDiff] Adstack 1: Add baseline adstack regression test for unary_collections [AutoDiff] Autodiff 1: Add baseline adstack regression test for unary_collections Apr 17, 2026
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Opus summary:

Summary

Adds a baseline regression test for reverse-mode AD (adstack) through dynamic loops
whose loop-variant operand feeding a non-linear unary op is loaded but never stored back
in the inner body. This pattern exercises the AdStackAllocaJudger promotion path that
depends on NonLinearOps::unary_collections membership — without promotion, BackupSSA
spills the operand into a single plain alloca that every forward iteration overwrites,
producing silently wrong gradients on the backward pass.
The test parametrizes over the unary ops currently in unary_collections
(abs, sin, cos, asin, acos, log, sqrt) and cross-validates the
Quadrants gradient against PyTorch autograd.

Strengths

  • Targets a specific, subtle bug vector. The kernel structure (redefine a from
    scratch each iteration, no LocalStore(a) after LocalLoad(a)) isolates
    unary_collections as the sole promotion trigger, so dropping any op from that set
    causes a test failure.
  • Well-documented. The long comment explains why the test is shaped the way it is,
    what breaks if the code under test regresses, and how follow-up PRs will extend it.
  • Cross-validates against PyTorch autograd, which is a reliable oracle for gradient
    correctness.
  • Designed for incremental extension. The comment explicitly calls out future
    parametrize entries for tan, tanh, exp, and rsqrt in follow-up PRs.
  • Proper guards. Uses @pytest.mark.needs_torch, require=qd.extension.adstack,
    and ad_stack_experimental_enabled=True so the test only runs in capable environments.

Weaknesses / things to consider

  • Single input value. Only tests x_val = 0.5. Some of these ops have interesting
    behaviour near domain boundaries (e.g. acos/asin near ±1, log/sqrt near 0).
    A second input value closer to a boundary would increase confidence.
  • Single field size. The dense axis is size 1. A slightly larger field (e.g. 4)
    would verify that per-element gradient accumulation works correctly across multiple
    elements.
  • Fixed loop count. Only range(3) is tested. Adding a second count (e.g. 1 or 10)
    would guard against off-by-one issues in the reversed loop.
  • No forward-pass assertion. The test checks gradients but not that the forward
    output y[None] matches the PyTorch reference. A one-line assert would be cheap
    insurance.
  • Loose tolerance. rel=1e-3 is generous for float32 arithmetic that involves at
    most 3 loop iterations. rel=1e-5 would likely still pass and catch more drift.

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Comment thread tests/python/test_adstack.py
@hughperkins

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Please could you address Opus's points:

  • Single input value. Only tests x_val = 0.5. Some of these ops have interesting
    behaviour near domain boundaries (e.g. acos/asin near ±1, log/sqrt near 0).
  • A second input value closer to a boundary would increase confidence.
    Single field size. The dense axis is size 1. A slightly larger field (e.g. 4)
    would verify that per-element gradient accumulation works correctly across multiple
    elements.
  • Fixed loop count. Only range(3) is tested. Adding a second count (e.g. 1 or 10)
    would guard against off-by-one issues in the reversed loop.
  • No forward-pass assertion. The test checks gradients but not that the forward
    output y[None] matches the PyTorch reference. A one-line assert would be cheap
    insurance.
  • Loose tolerance. rel=1e-3 is generous for float32 arithmetic that involves at
    most 3 loop iterations. rel=1e-5 would likely still pass and catch more drift.

Comment thread tests/python/test_adstack.py Outdated
@test_utils.test(require=qd.extension.adstack, ad_stack_experimental_enabled=True)
def test_adstack_unary_loop_carried(qd_op, torch_op):
# Baseline regression test for reverse-mode AD through dynamic loops whose only loop-variant
# operand feeding a non-linear unary op is read via `LocalLoad` (no subsequent `LocalStore` back

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this doc is not very readable. might be good to express it in python terms if possible.

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proposal from opous:

      # Regression test for reverse-mode AD through a dynamic loop that applies a non-linear unary op
      # to a value recomputed each iteration from a field read and the loop index. The key detail is
      # that `a` is rebuilt from scratch every iteration (`x[i] + j * 0.1`) rather than accumulated,
      # so the AD system must save a per-iteration copy of `a` for the backward pass. Without that,
      # every backward step replays the *last* forward value of `a`, producing silently wrong
      # gradients.
      #
      # Each parametrized op (abs, sin, cos, …) must be individually recognised as non-linear for this
      # saving to kick in; dropping any one of them causes the test to fail. Follow-up PRs extend the
      # parametrize list as they add new ops (tan) or fix ops that had buggy reverse formulas
      # (tanh/exp) or were missing entirely (rsqrt).

@duburcqa
duburcqa force-pushed the duburcqa/split_adstack_unary_baseline branch from 564dced to ce6df24 Compare April 17, 2026 12:29
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Addressed all five points by hardening the test:

  • Multiple x_val ([0.2, 0.3]): one small sample for log/sqrt/rsqrt sensitivity near zero and one closer to the asin/acos domain boundary. The 0.05 step keeps x_val + (n_iter-1)*0.05 + (n-1)*0.05 below 1.0 for every op's domain.
  • Multiple n_iter ([1, 3, 10]): 1 smoke-tests the single-push adstack path, 10 stresses accumulation over many iterations.
  • Field size 4 (was 1): catches per-element gradient accumulation regressions. Each element takes a different x_val offset, so every test case cross-validates gradients at multiple input points at once.
  • Forward-pass assertion added: assert y[None] == test_utils.approx(y_t.item(), rel=1e-5) alongside the per-element grad check.
  • Tolerance tightened from 1e-3 to 1e-5 on both the forward and backward assertions.

The parametrize list is unchanged (still the 7 ops safe on main); follow-up PRs #501/#502/#503 extend it with tan, tanh/exp, and rsqrt.

@duburcqa
duburcqa force-pushed the duburcqa/split_adstack_unary_baseline branch from ce6df24 to dd0d6c0 Compare April 17, 2026 12:31
Comment thread tests/python/test_adstack.py Outdated
Comment thread tests/python/test_adstack.py Outdated
Comment thread tests/python/test_adstack.py Outdated
@duburcqa
duburcqa force-pushed the duburcqa/split_adstack_unary_baseline branch from dd0d6c0 to 18ea756 Compare April 17, 2026 12:42
Comment thread tests/python/test_adstack.py Outdated
Comment thread tests/python/test_adstack.py
Comment thread tests/python/test_adstack.py Outdated

@pytest.mark.parametrize("n_iter", [3, 10])
@test_utils.test(require=qd.extension.adstack)
def test_adstack_abs_sign_flip_loop_carried(n_iter):

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why split this out? why not fuse it with the earlier test, and simply paramterize over some negative values too? (sin, cos both work with think? For values that arent compatible, you can check that both epxected and actual are nan I guess?)

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It is explained in the description of the unit test. Unless you disagree with it.

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so you are iterating over j, and using j in the formula for a? why cant we do the same thing in the first unit test, and unify the two tests?

Comment thread tests/python/test_adstack.py Outdated

@pytest.mark.needs_torch
@pytest.mark.parametrize("n_iter", [1, 3, 10])
@pytest.mark.parametrize("x_val", [0.2, 0.3])

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add a negative value, and add abs to the list of ops?

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Reran opus:

Weaknesses / things to consider

  • No domain-boundary inputs. Input values 0.2/0.3 stay safely in the interior
    of every op's domain. Values near boundaries (e.g. acos/asin near ±1, log/sqrt
    near 0) would test numerical stability of the gradient formulas.
  • Docstring still references internal compiler concepts (NonLinearOps::unary_collections,
    "promotion", "plain scratch slot"). The opening sentence is now plain English, but the
    detail could be further simplified for someone reading only the Python test.
  • abs test uses hand-computed reference instead of PyTorch. This is arguably fine
    (the formula is trivial), but using torch.abs for consistency would make it obvious
    that the same oracle strategy applies everywhere.

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Please address Opus's last comments, ie:

  • No domain-boundary inputs. Input values 0.2/0.3 stay safely in the interior
    of every op's domain. Values near boundaries (e.g. acos/asin near ±1, log/sqrt
    near 0) would test numerical stability of the gradient formulas.
  • Docstring still references internal compiler concepts (NonLinearOps::unary_collections,
    "promotion", "plain scratch slot"). The opening sentence is now plain English, but the
    detail could be further simplified for someone reading only the Python test.
  • abs test uses hand-computed reference instead of PyTorch. This is arguably fine
    (the formula is trivial), but using torch.abs for consistency would make it obvious
    that the same oracle strategy applies everywhere.

Comment thread tests/python/test_adstack.py Outdated
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duburcqa force-pushed the duburcqa/split_adstack_unary_baseline branch from 18ea756 to 13787f5 Compare April 17, 2026 15:56

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LGTM — all prior concerns addressed: sign-crossing operand, redundant kwarg removed, and docstring invariant scoped to n_iter >= 3.

Extended reasoning...

Overview

This PR adds a single new test file () with a parametrized regression test for reverse-mode AD through dynamic loops whose loop-variant operand feeds a non-linear unary op. The test cross-validates Quadrants gradients against PyTorch autograd across 7 ops, 4 x_val boundary samples, and 3 n_iter counts.

Security risks

None. This is a test-only addition with no production code changes.

Level of scrutiny

Low — test-only change, no logic or API surface affected. The mathematical correctness of the test design is the main concern, and three rounds of review have thoroughly vetted it.

Other factors

All prior inline review concerns have been resolved: the case now uses to cross zero (making correct and wrong gradients distinguishable), the redundant kwarg was dropped, the misleading comment formula was removed, and the docstring now correctly scopes the regression invariant to while explaining that is a single-push smoke test. The -without- pattern is confirmed as the repo convention. No outstanding comments remain unaddressed.

@hughperkins

hughperkins commented Apr 20, 2026

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Updated opus description:

Summary

Adds a single new regression test, tests/python/test_adstack.py, that pins reverse-mode AD behavior for loop-carried unary ops.
The test cross-checks d/dx Σ_j op(x + j*step + offset) against PyTorch autograd for a parametrized set of unary ops (sin, cos, abs, log, sqrt, asin, acos),
across n_iter ∈ {1, 3, 10} and x_val ∈ {0.001, 0.15, 0.26, 0.399}. The intent is to catch regressions where a unary op is dropped from the AD transform's per-iteration
operand set: the operand then falls back to a single overwritten slot, and the reversed loop reads the last-iteration value for every backward step, producing wrong gradients
at n_iter ≥ 3.

What's in the PR

Net diff vs origin/main: 1 file, +89 / -0 — purely additive.

  • New file: tests/python/test_adstack.py (+89 lines).
  • Per-op (step, offset) chosen so the operand stays inside the op's domain for every (x_val, n_iter) combination, while still crossing zero for abs/sin/cos so the
    per-iteration sign actually varies (otherwise abs's piecewise-constant derivative would make the test pass trivially).
  • x_val samples cover both interior points and domain edges (0.001 near 0 for log/sqrt; 0.399 near 1 for asin/acos).
  • Tolerance: rel=1e-4 (loosened from a tighter initial value to accommodate f32).
  • Gated by @pytest.mark.needs_torch and @test_utils.test(require=qd.extension.adstack).
    Commits (4 + 1 merge):
  • 848ae6bfb Add baseline adstack regression test for unary_collections.
  • 15befa000 Simplify adstack unary test docstring per review.
  • 8e99b4631 Rephrase adstack unary test docstring to drop remaining compiler-internal terms.
  • 13787f5b6 Rephrase adstack unary test docstring as user-facing and loosen tolerance to rel=1e-4 for f32.
  • 2d016ffb4 Merge main into branch.

Good points

  • Targeted regression coverage. Pins a specific, known failure mode (loop-variant unary op missing from the AD per-iteration operand set) that wouldn't be caught by
    single-iteration tests.
  • Cross-checked against PyTorch rather than against a hand-derived analytical gradient, so the oracle is independently maintained.
  • Domain- and edge-aware parametrization. x_val deliberately probes near-singular points of each op's gradient (log/sqrt near 0, asin/acos near 1), and 0.26 is
    chosen instead of 0.25 specifically to avoid abs's undefined derivative at 0.
  • Sign-crossing operand for abs/sin/cos ensures the per-iteration sign varies, so the test isn't trivially satisfied by a constant-derivative shortcut.
  • n_iter = 1 included as a sanity baseline alongside the n_iter ∈ {3, 10} cases that actually exercise the loop-carried path.
  • Self-documenting: the docstring explains both the user-facing intent and the internal AD mechanism the test pins, plus how to extend the parametrize list when a new
    unary op becomes differentiable through dynamic loops.
  • Clean, additive diff. Now that main is merged in, the PR is exactly one new file — easy to review, zero risk of touching unrelated code.

Bad points / concerns

  • Test is a pin, not a fix. It locks in current behavior but doesn't itself address any bug; if the underlying AD operand-set is fragile, this test surfaces regressions
    but doesn't prevent the class of issue.
  • Single dtype (f32) only. No f64 variant, despite the tolerance discussion implying f32 was chosen specifically. An f64 parametrization with a tighter tolerance would
    strengthen the oracle.
  • Tolerance was loosened (rel=1e-4). Reasonable for f32, but worth confirming the loosening was driven by genuine f32 round-off rather than masking a real numerical
    issue.
  • Parametrize matrix is 3 × 4 × 7 = 84 cases, all PyTorch-gated. Not large in absolute terms, but every new unary op added per the docstring's extension instructions
    multiplies by 12, so the suite will grow if followed literally.
  • Hard-coded n = 4 and stride 0.05 for both the Quadrants field initialization and the PyTorch reference; named constants or a small helper would make the coupling
    between the two sides more obvious and harder to desync.
  • Merge commit rather than rebase. Minor style point — the branch was brought up to date via git merge main rather than rebased, so the final history includes a merge
    commit. Depending on repo conventions, a rebase + force-push might be preferred.

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can you comment on:

Single dtype (f32) only. No f64 variant, despite the tolerance discussion implying f32 was chosen specifically. An f64 parametrization with a tighter tolerance would
strengthen the oracle.

please

Comment thread tests/python/test_adstack.py Outdated
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Comment thread tests/python/test_adstack.py
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LGTM — all raised issues have been addressed, including the f64 tolerance floor fix.

Extended reasoning...

Overview

Single new test file tests/python/test_adstack.py (+107 lines, no production code changes). It pins reverse-mode AD correctness for loop-carried unary ops by cross-checking gradients against PyTorch autograd across seven ops, four x_val samples, and three n_iter counts in both f32 and f64.

Security risks

None. This is a test-only addition with no new executable production paths.

Level of scrutiny

Low. The change is purely additive, confined to the test suite, and has no impact on any production or library code. The correctness of the test itself is the only concern.

Other factors

The PR went through several rounds of review feedback, all of which have been addressed in the current revision:

  • The abs parametrize case is no longer degenerate: ("abs", 0.3, -0.4) ensures the operand crosses zero so per-iteration signs vary.
  • The f64 tolerance concern (my 2026-04-21 inline comment) is fixed: assertions now use pytest.approx directly, bypassing the test_utils.approx 1e-6 floor, with an explanatory inline comment.
  • The redundant ad_stack_experimental_enabled=True kwarg has been removed.
  • The docstring accurately scopes the multi-iteration regression invariant to n_iter >= 3 and notes n_iter = 1 is a single-push smoke test.
  • No bugs were found by the automated bug hunting system.

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Checklist:

  • just a bug fix => doesn't change existing API or usage
    • no need for doc changes
  • doesn't add significantly more code around diverse files

=> ok to merge

@duburcqa
duburcqa force-pushed the duburcqa/split_adstack_unary_baseline branch from 323ebdf to 6a8cc3d Compare April 21, 2026 18:44
@duburcqa
duburcqa force-pushed the duburcqa/split_adstack_unary_baseline branch from 6a8cc3d to cc4f5fa Compare April 21, 2026 19:05
Comment thread tests/python/test_adstack.py
@duburcqa
duburcqa merged commit 9a17db2 into main Apr 21, 2026
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@duburcqa
duburcqa deleted the duburcqa/split_adstack_unary_baseline branch April 21, 2026 21:46
npoulad1 added a commit to ROCm/quadrants that referenced this pull request Jun 8, 2026
* [Misc] Warn user to disable caching when print_ir/QD_DUMP_IR enabled (Genesis-Embodied-AI#425)

Co-authored-by: v01dxyz <v01dxyz@v01d.xyz>

* [Build] Pin torch version to CUDA 12.8 for CUDA tests (Genesis-Embodied-AI#428)

* [Misc] Fixing up taichi-dev urls (Genesis-Embodied-AI#429)

* [Perf] Rename cuda_graph to gpu_graph across the codebase (Genesis-Embodied-AI#430)

* Misc: fix typo integeral -> integral (Genesis-Embodied-AI#434)

Co-authored-by: v01dxyz <v01dxyz@v01d.xyz>

* [Perf] CUDA graph 4: call from multiple locations (Genesis-Embodied-AI#420)

* [Bug] Fix fastcache not restoring graph_do_while_arg (Genesis-Embodied-AI#435)

* [Perf] Cache last-call result in perf_dispatch for single-compatible case (Genesis-Embodied-AI#438)

* Fix gpu_graph fallback on old Nvidia GPU. (Genesis-Embodied-AI#443)

* Fix shared memory offset not reset between CUDA kernels. (Genesis-Embodied-AI#442)

* [Misc] Allow disabling GPU graph via QD_GPU_GRAPH=0 env var (Genesis-Embodied-AI#439)

* [Misc] Add named top-level loops (Genesis-Embodied-AI#440)

* [Misc] Rename gpu_graph to graph (Genesis-Embodied-AI#446)

* [Misc] Add cross-platform shuffle (Genesis-Embodied-AI#447)

* [Bug] Fix graph_do_while on Windows: search for cudadevrt.lib (Genesis-Embodied-AI#456)

* [Bug] Also search default CUDA toolkit install location on Windows (Genesis-Embodied-AI#461)

* [SPIRV] Feature Parity Atomics & Shared Array (Genesis-Embodied-AI#432)

* [Misc] Change clang format to 120 characters (Genesis-Embodied-AI#463)

* [Misc] CUDA graph 5 Add fatbin (Genesis-Embodied-AI#464)

* [Bug] Reuse VkInstance across init/reset cycles (Genesis-Embodied-AI#465)

* [Perf] Tiles 1: _load, _store, _eye_ (Genesis-Embodied-AI#466)

* [Misc] Remove dead InternalFuncStmt type_check override (Genesis-Embodied-AI#471)

* [Perf] Tiles 2: add cholesky and ger (Genesis-Embodied-AI#472)

* [Perf] Tiles 2b: add triangular solve (Genesis-Embodied-AI#474)

* [Misc] Refactor: use _get_col/_set_col in tiles load/store/init (Genesis-Embodied-AI#475)

* [Build] Fix flaky test_clock_accuracy (Genesis-Embodied-AI#436)

* Fix AARCH64 emitting invalid asm in CUDA kernels. (Genesis-Embodied-AI#473)

Co-authored-by: Hugh Perkins <hughperkins@gmail.com>

* [AMDGPU] Enable HIP memory pool and surface pool-exhaustion errors. (Genesis-Embodied-AI#485)

* [AMDGPU] Scope hsaco tmp dir per-user to avoid collisions. (Genesis-Embodied-AI#484)

* [Perf] Tiles 3: Add slice syntax, qd.outer() and initial doc (Genesis-Embodied-AI#477)

* [AMDGPU] Fix gradient computation. (Genesis-Embodied-AI#486)

* Enable all backends that are supported in unit tests. (Genesis-Embodied-AI#488)

* Fix SPIRV ID overflow for large kernels due to autodiff. (Genesis-Embodied-AI#489)

* [Misc] Fix purity checker to allow accessing constants from quadrants modules (Genesis-Embodied-AI#487)

* [Misc] Increase tolerance for clock monotonic test (Genesis-Embodied-AI#492)

* [CI] Serialize api doc workflow (Genesis-Embodied-AI#494)

* [CI] Increase tolerance for clock test (Genesis-Embodied-AI#506)

* [CI] Increase clock test tolerance to 20% (Genesis-Embodied-AI#509)

* [Perf] Add tensor_type parametrization to tile16 tests (Genesis-Embodied-AI#504)

* [Perf] Tiles 4b: Migrate tiles16 tests to enable fastcache (Genesis-Embodied-AI#505)

* [Perf] Tiles 4c: add Tiles16x16 proxy (Genesis-Embodied-AI#507)

* [Perf] Tiles 4d: Consolidate slice error tests using parametrize (Genesis-Embodied-AI#508)

* [Perf] Tiles 4: add SharedArray slice support (Genesis-Embodied-AI#482)

* [Perf] Tiles 5: add Cholesky benchmark demo (Genesis-Embodied-AI#483)

* [Doc] Add user guide page for subgroup shuffle (Genesis-Embodied-AI#512)

* [Perf] Implement cross-platform shuffle_down (Genesis-Embodied-AI#510)

* [Perf] Add portable subgroup reduce_add and reduce_all_add (Genesis-Embodied-AI#511)

* [Perf] Add first warmup config to perf dispatch (Genesis-Embodied-AI#422)

* [AutoDiff] Autodiff 1: Add baseline adstack regression test for unary_collections (Genesis-Embodied-AI#500)

* [AutoDiff] Autodiff 2: Implement derivative for tan (Genesis-Embodied-AI#501)

* [AutoDiff] Autodiff 3: Recompute tanh/exp on the operand in the reverse pass (Genesis-Embodied-AI#502)

* [AutoDiff] Autodiff 4: Mark rsqrt as non-linear for adstack promotion (Genesis-Embodied-AI#503)

* [AutoDiff] Autodiff 5: Fix adjoint-alloca placement for GlobalLoads outside the current range-for (Genesis-Embodied-AI#496)

* [AutoDiff] Autodiff 6: Adstack regression tests (Genesis-Embodied-AI#491)

* [AutoDiff] Autodiff 7: Fix header size in AdStackAllocaStmt to match u64 runtime layout (Genesis-Embodied-AI#534)

* [AutoDiff] Autodiff 8: Surface LLVM adstack push/pop overflow as a Python exception (Genesis-Embodied-AI#535)

* [AutoDiff] Autodiff 9: Guard against LLVM worker-thread stack overflow from large per-task adstack budget (Genesis-Embodied-AI#495)

* [AutoDiff] Autodiff 10: Implement adstack for SPIR-V (Genesis-Embodied-AI#490)

* [AutoDiff] Autodiff 11: Latent adstack-adjacent fixes (AMDGPU hipFree, flush() keeps ctx_buffers_, always-preallocate) (Genesis-Embodied-AI#536)

* [Doc] Add AGENTS.md with instructions for AI agents (Genesis-Embodied-AI#541)

* [Bug] Abort kernel execution on assertion failure instead of segfaulting (Genesis-Embodied-AI#419)

* [Type] ndarray typing 1: Add eval_str=True to inspect.signature() calls (Genesis-Embodied-AI#411)

* [CI] Suppress reportPrivateImportUsage in torch-using files (Genesis-Embodied-AI#552)

* [Misc] QD_DUMP_IR dumps to files with the task_id added to the filename (Genesis-Embodied-AI#441)

* [Type] ndarray typing 2: Fix NDArray single-arg subscript crash (Genesis-Embodied-AI#412)

* [Test] Flush xdist channel before worker exit so test failure reports are visible (Genesis-Embodied-AI#555)

* [CI] Reduce test retries on CI from 3 to 1. (Genesis-Embodied-AI#554)

* [AutoDiff] Autodiff 12: Heap-backed adstack on LLVM backends (CPU/CUDA/AMDGPU) (Genesis-Embodied-AI#537)

* [AutoDiff] Autodiff 13: Heap-backed adstack on SPIR-V backends (Metal, Vulkan) (Genesis-Embodied-AI#493)

* [AutoDiff] Autodiff 14: Resolve bounded-inner-loop adstacks without default_ad_stack_size fallback (Genesis-Embodied-AI#539)

* [SPIRV] Vulkan SPIR-V correctness: atomic-view aliasing, PSB stride, narrow storage caps, u1 cast, per-init layer recheck (Genesis-Embodied-AI#513)

* [Build] Autodiff 15: Replace 2022 MoltenVK pin with LunarG Vulkan SDK fetch and sanitise MoltenVK cap advertisement (Genesis-Embodied-AI#551)

* [Test] Suppress stock pytest-timeout to avoid conflict with pytest_hardtle (Genesis-Embodied-AI#557)

* [Vulkan] Use SDK validation layer for debugPrintf instead of apt package (Genesis-Embodied-AI#562)

* [Test] Fix flaky perf_dispatch tests by increasing work amounts (Genesis-Embodied-AI#559)

* [Test] Add --maxfail CLI option to run_tests.py (default 20) (Genesis-Embodied-AI#558)

* [CI] Vulkan debug printf fix to address flaky tests (Genesis-Embodied-AI#563)

* [Docs] Add a new page to help for first time contributors (Genesis-Embodied-AI#426)

Authored-by: v01dxyz <v01dxyz@v01d.xyz>

* [AutoDiff] Autodiff 16: Resolve reverse-mode adstack depths per-launch via runtime-evaluated SizeExpr (Genesis-Embodied-AI#543)

* Fix: raise error if device memory allocation fails (Genesis-Embodied-AI#451) (Genesis-Embodied-AI#453)

Co-authored-by: v01dxyz <v01dxyz@v01d.xyz>
Co-authored-by: Hugh Perkins <hughperkins@gmail.com>

* [CI] Add CI job to check line wrapping of comments and docs (Genesis-Embodied-AI#564)

* [Misc] Add coverage report to PRs, including kernels (Genesis-Embodied-AI#470)

* [CI] CI wrap check feeds only diffs to agent (Genesis-Embodied-AI#567)

* Skip 'flaky' test on MacOS CI. (Genesis-Embodied-AI#573)

* [Test] Fix missing `import sys` in test_fail_device_memory_allocation (Genesis-Embodied-AI#574)

* [CI] Fix Vulkan debugPrintf flake with session-scoped warmup (Genesis-Embodied-AI#571)

* [AutoDiff] determine_ad_stack_size: replace whole-CFG Bellman-Ford with SCC + DAG DP (Genesis-Embodied-AI#575)

* [Test] Fix macOS OOM skip reason to describe actual root cause (Genesis-Embodied-AI#576)

* [Lang] whole_kernel_cse: 2.5x compile time speedup on large kernels (Genesis-Embodied-AI#577)

* [CI] Add CI check for unnecessarily deleted comments (Genesis-Embodied-AI#570)

* [CI] Migrate coverage report to github Check page (Genesis-Embodied-AI#566)

* [Lang] Skip IR verifier between passes unless debug=true (Genesis-Embodied-AI#579)

* [Lang] Inline AdStack ops on release LLVM codegen: dramatically reduces compile time for adstack-enabled reverse-mode kernels (Genesis-Embodied-AI#584)

* [CUDA] Honor offline_cache=False end-to-end so QD_OFFLINE_CACHE=0 actually gives a cold compile (Genesis-Embodied-AI#580)

* [Type] Tensor 24 (Genesis-Embodied-AI#561)

Co-authored-by: hugh <hugh@slurm-login-0.slurm-login.tenant-slurm.svc.cluster.local>

* [Lang] auto_diff host-walk reductions: dramatically faster front-end compile time on adstack-enabled reverse-mode kernels (Genesis-Embodied-AI#587)

* [AutoDiff] Speed up reverse-mode kernel launches on GPU backends (Genesis-Embodied-AI#578)

* [Vulkan] Move adstack-sizer scratch out of Function-scope memory to fix SPIR-V pipeline build failures (Genesis-Embodied-AI#588)

* [AutoDiff] Improve diagnosis of unsupported reverse-mode AD patterns (Genesis-Embodied-AI#590)

* [Bug] Fix: promote Ndarray to AnyArray in build_Name for flattened struct fields (Genesis-Embodied-AI#592)

* [SPIR-V] Shrink reverse-grad kernel MSL by ~50% (Genesis-Embodied-AI#591)

* [CI] Add CI check that PR changes have test coverage (Genesis-Embodied-AI#596)

* [Perf] Enable zero-copy in to_torch() and to_numpy() (Genesis-Embodied-AI#450)

* Add BufferView: safe sub-range ndarray access for kernels (Genesis-Embodied-AI#585)

Co-authored-by: alanray-tech <alanray-tech@users.noreply.github.com>
Co-authored-by: Hugh Perkins <hughperkins@gmail.com>

* [Doc] Add user-facing fastcache documentation (Genesis-Embodied-AI#597)

Co-authored-by: hugh <hugh@slurm-login-0.slurm-login.tenant-slurm.svc.cluster.local>

* [Misc] Upgrade to enable v1 dlpack so to_numpy(copy=False) writable (Genesis-Embodied-AI#598)

Co-authored-by: root <root@rtx-209-201.slurm-compute.tenant-slurm.svc.cluster.local>

* [AutoDiff] Cut reverse-mode adstack memory usage 10x on all backends (Genesis-Embodied-AI#599)

* [Misc] Add CI check for feature file factorization (Genesis-Embodied-AI#606)

* [Perf] Skip _recursive_set_args for all-Field frozen dataclass structs (Genesis-Embodied-AI#607)

Co-authored-by: Cursor <cursoragent@cursor.com>

* [AutoDiff] SNode-arm bound-expr capture rejects fold-attack gate indices (Genesis-Embodied-AI#610)

* [Misc] Suppress field fastcache warning for qd.Tensor (Genesis-Embodied-AI#615)

Co-authored-by: Cursor <cursoragent@cursor.com>

* [AutoDiff] Adstack heap: clip reducer count by per-task loop trip count (compile-time and SizeExpr-evaluated) (Genesis-Embodied-AI#611)

* [Misc] Forward copy= through qd.Tensor, add copy=None option (Genesis-Embodied-AI#616)

Co-authored-by: Cursor <cursoragent@cursor.com>

* [Doc] Update README (Genesis-Embodied-AI#617)

Co-authored-by: Cursor <cursoragent@cursor.com>

* [CI] Fix coverage report showing def lines as uncovered (Genesis-Embodied-AI#623)

Co-authored-by: Cursor <cursoragent@cursor.com>

* [Perf] Generic launcher: persistent context, JIT-pointer reuse, Metal compute encoder, LLVM-GPU async memory ops (Part 1/2) (Genesis-Embodied-AI#619)

* [CI] Encode Python-first testing policy in coverage-check prompt (Genesis-Embodied-AI#622)

Co-authored-by: Cursor <cursoragent@cursor.com>

* [CI] Add PR Line change report (Genesis-Embodied-AI#624)

Co-authored-by: Cursor <cursoragent@cursor.com>

* [CI] Disable quadrants pytest plugin during quadrants internal coverage runs (Genesis-Embodied-AI#629)

Co-authored-by: Cursor <cursoragent@cursor.com>

* [AutoDiff] Adstack load+store eliminations: EliminateRecomputableAdStackPushes pass + leaf extensions (Genesis-Embodied-AI#621)

* [CI] Simplify coverage PR comment to a single linked line (Genesis-Embodied-AI#630)

* [CUDA] Add AGX Thor, SM_110 (Genesis-Embodied-AI#631)

Co-authored-by: Johnny Nunez and Hugh Perkins

* [CI] Lines changed report: collapse PR comment to a single linked totals line (Genesis-Embodied-AI#632)

* [FEATURE] Support external Metal command queue via qd.init (Genesis-Embodied-AI#618)

Co-authored-by: Cursor <cursoragent@cursor.com>

* [Perf] Cache adstack-sizer metadata per task across SPIR-V + LLVM-GPU; per-snode / DeviceAllocation invalidation (Part 2/2) (Genesis-Embodied-AI#620)

* [AutoDiff] Disable EliminateRecomputableAdStackPushes pending mutated-SNode chain-leaf fix (Genesis-Embodied-AI#633)

* [AutoDiff] Adstack chain-clone safety: mutated-SNode leaf reject + load_top consumer-aware guard (Genesis-Embodied-AI#634)

* [Docs] Add user-guide page for qd.simt.block.* primitives (Genesis-Embodied-AI#638)

* [Docs] Expand qd.simt.subgroup user-guide page to cover every op (Genesis-Embodied-AI#639)

* [Perf] Streams 1-4 (Genesis-Embodied-AI#410)

* [Docs] Add user-guide page for matrix decompositions and solvers (Genesis-Embodied-AI#643)

* [Bug] Revert "[Perf] Streams 1-4 (Genesis-Embodied-AI#410)" (Genesis-Embodied-AI#650)

* [Docs] Add user-guide page for atomics and bit operations (Genesis-Embodied-AI#640)

* [Docs] Add user-guide page for qd.simt.grid.* primitives (Genesis-Embodied-AI#641)

* [AutoDiff] Adstack max-reducer: parallel multi-axis MaxOverRange dispatch (Genesis-Embodied-AI#635)

* [AMDGPU] Fix amdgpu parallel rand init (Genesis-Embodied-AI#658)

* [Perf] Adstack: skip max-reducer recognizer on CPU + lift host-eval cap (Genesis-Embodied-AI#655)

* [Perf] Re-land Streams 1-4 with bug fixes (Genesis-Embodied-AI#653)

* [AMDGPU] Apply device_memory_GB=0.3 cap to AMDGPU tests (Genesis-Embodied-AI#659)

* [Perf] Per-launch host sync: drop wait_idle on SPIR-V, pin stream and drop stream_synchronize on CUDA/AMDGPU (Genesis-Embodied-AI#654)

* [AMDGPU] Unload hipModule_t in JITModuleAMDGPU destructor (Genesis-Embodied-AI#660)

* [AMDGPU] Trim default mempool on qd.reset() (Genesis-Embodied-AI#669)

* [AMDGPU] Hoist rand-state buffer to process lifetime (Genesis-Embodied-AI#668)

* [Streams] Use events for streams serialization on AMDGPU and CUDA (Genesis-Embodied-AI#667)

* [Perf] Adstack max-reducer: launch cache + zero-copy result map; content-stable registry_id (Genesis-Embodied-AI#671)

* [SPIR-V] dispatch_max_reducers: register each task with the real kernel name (Genesis-Embodied-AI#675)

* [AutoDiff] Debug-mode field/grad/dual: dtype, layout, and access-time invariants (Genesis-Embodied-AI#677)

* [Docs] Add user-guide page for qd.algorithms.* device-wide algorithms (Genesis-Embodied-AI#642)

Co-authored-by: alanray-tech <alan.ray@genesis-ai.company>

* [Docs] Doc for existing atomics: switch support table to per-backend columns (Genesis-Embodied-AI#657)

Co-authored-by: alanray-tech <alan.ray@genesis-ai.company>

* [GPU] Cross gpu atomics (Genesis-Embodied-AI#666)

Co-authored-by: alanray-tech <alan.ray@genesis-ai.company>

* [GPU] Make block operations portable cross-gpu (Genesis-Embodied-AI#664)

* [Perf] CPU LLVM adstack-cache: skip per-launch bump-writes + ndarray_shapes capture on forward-only handles (Genesis-Embodied-AI#685)

* [GPU] Cross-GPU for grid ops (Genesis-Embodied-AI#670)

* [Math] Make bitop operations portable cross-gpu (Genesis-Embodied-AI#662)

* [AMDGPU] Always use wave64, on both RDNA and CDNA (Genesis-Embodied-AI#687)

* [AMDGPU] Use syncscope("agent") for atomix xor to avoid CAS livelock (Genesis-Embodied-AI#672)

* [GPU] New bit ops for QIPC (Genesis-Embodied-AI#679)

* [GPU] Subgroup ops cross-gpu (Genesis-Embodied-AI#665)

* [Graph] Rename CUDA Graph to Graph in docs (Genesis-Embodied-AI#691)

* [SPIR-V] Fix FIFO-queue ordering when sharing command queue. (Genesis-Embodied-AI#694)

* [Atomics] New QIPC ops for atomics (Genesis-Embodied-AI#690)

* Pass dataclass sub-structs into qd.func (Genesis-Embodied-AI#698)

* [AMDGPU] HIP graph runtime support for @qd.kernel(graph=True) (Genesis-Embodied-AI#692)

* [CI] Add per-file timing report to Mac Metal test job (Genesis-Embodied-AI#695)

Co-authored-by: Cursor <cursoragent@cursor.com>

* [CI] Enable kernel disk cache during tests (Genesis-Embodied-AI#696)

* [Math] New QIPC ops for single-threaded linalg (Genesis-Embodied-AI#683)

* [BREAKING][GPU] New QIPC ops for subgroups (Genesis-Embodied-AI#676)

* [GPU] New QIPC ops for block (Genesis-Embodied-AI#684)

* [GPU] New device-level ops for QIPC (Genesis-Embodied-AI#693)

* [algorithms] PrefixSumExecutor: drop unused GRID_SZ local (Genesis-Embodied-AI#701)

* [block] sync(): fix unsupported-arch error message (Genesis-Embodied-AI#700)

* [volatile_load] add qd.volatile_load primitive (closes Genesis-Embodied-AI#648) (Genesis-Embodied-AI#702)

* [AutoDiff] Reject recycled identity_key in AdStackCache::register_adstack_sizing_info (Genesis-Embodied-AI#708)

* [Vulkan] Declare GroupNonUniform SPIR-V caps and enable shaderSubgroupExtendedTypes (Genesis-Embodied-AI#707)

* Fix duplicate HIP graph driver-function declarations after v1.0.0 merge

The amd-integration fork had cherry-picked the HIP graph driver functions
(graph_create / graph_destroy / graph_add_kernel_node / graph_instantiate /
graph_exec_destroy / graph_launch), and upstream v1.0.0 added the same set.
The per-file 3-way merge appended both copies into
amdgpu_driver_functions.inc.h, producing redeclaration errors that broke the
AMDGPU RHI/runtime compile. Drop the upstream duplicate block; the signatures
are identical to the fork's existing declarations.

Co-authored-by: Cursor <cursoragent@cursor.com>

* Fix AMDGPU launcher coherence and num_instructions visibility after v1.0.0 merge

- kernel_launcher.cpp: the 3-way merge spliced upstream v1.0.0's launch_llvm_kernel
  rewrite (ephemeral arg/context buffers, explicit-stream path, AmdgpuDefaultStream
  PinGuard) onto the AMD fork's kernarg-by-value + persistent-scratch design,
  leaving references to undefined `ephemeral_context_ptr`. Restore the fork's
  coherent launch_llvm_kernel verbatim; it calls the (already merged) enhanced
  launch_offloaded_tasks, which keeps the max-reducer dispatch and stream-parallel
  groups adapted onto the AMD launch path.
- llvm_context.h: both the fork and upstream added `num_instructions`; the merge
  kept upstream's private placement, but the AMDGPU codegen force-inline heuristic
  calls it statically from outside the class. Move it back to the public section.

Co-authored-by: Cursor <cursoragent@cursor.com>

* Restore async result D2H and hoist kernarg vectors in AMDGPU launcher

The v1.0.0 merge resolution regressed two amd-integration baseline
optimizations in launch_llvm_kernel / launch_offloaded_tasks:

  - The per-launch result-buffer copy was a blocking memcpy_device_to_host,
    forcing a host stall on every value-returning launch and serializing the
    GPU pipeline. Restore the async D2H (the caller synchronizes lazily when it
    needs the value); external-array transfers still stream_synchronize once
    before reading back.

  - launch_task constructed the kernarg std::vectors from initializer lists
    ({kernarg_payload} / {kernarg_size}) on every dispatch (heap alloc + free
    per launch). Hoist arg_ptrs/arg_sizes out of the per-task launch and reuse.

Co-authored-by: Cursor <cursoragent@cursor.com>

* amdgpu: default to LDS permlane64 emulation; drop host-x86 barrier asm on retarget

Two AMDGPU JIT-compile crashes surfaced after the v1.0.0 merge pulled in the QIPC subgroup
ops (Genesis-Embodied-AI#676), which made the rigid constraint solver's wave-cooperative reductions route through
`amdgpu_cross_half_shuffle_i32`. Both manifested as a SIGSEGV inside
`llvm::SIInstrInfo::getInstSizeInBytes` during `JITSessionAMDGPU::compile_module_to_hsaco`
(i.e. at first kernel launch), and reproduce on gfx942 / MI300X. Baseline 0.4.6 never emitted
these constructs, which is why it was unaffected.

1. Native `llvm.amdgcn.permlane64` lowering crashes the bundled LLVM 22.1.0 AMDGPU backend.
   Default `amdgpu_permlane64` to the existing LDS-roundtrip software emulation on every target
   (it produces identical results). Add `QD_AMDGPU_USE_NATIVE_PERMLANE64=1` to opt back into the
   native instruction once the backend bug is fixed; the old `QD_AMDGPU_FORCE_PERMLANE64_FALLBACK`
   is now the default and still honored. This is the actual crash fix.

2. The runtime module is compiled by the host x86_64 clang and only retargeted to amdgcn here, so
   `amdgpu_cross_half_shuffle_i32`'s `__asm__ volatile("" : "+v"(byte))` optimization barrier carries
   x86 flag clobbers (`~{dirflag},~{fpsr},~{flags}`) that are meaningless on AMDGPU. The IR verifies
   but the empty-body INLINEASM is invalid on the amdgcn target. Neutralize empty-body barrier asm
   during retarget (forward the tied value, then erase) so no stale host asm reaches codegen. On the
   wave64 targets we ship `ds_bpermute` already addresses the full wave, so the hint is a no-op.

Co-authored-by: Cursor <cursoragent@cursor.com>

* style: apply clang-format (v19.1.7) to AMDGPU fn_attrs and launcher sources

CI pre-commit's clang-format hook reformatted these files (long
declarations/lambda signatures collapsed onto single lines per the repo's
clang-format config). Apply the same formatting so the hook passes.

No functional changes.

Co-authored-by: Cursor <cursoragent@cursor.com>

* fix(amdgpu): use CreateNeg for branchless i32 sgn instead of CreateSub(0, input)

clang-tidy (modernize-use-nullptr, -warnings-as-errors) flagged
`builder->CreateSub(0, input)` in the i32 sgn path: the literal `0` binds to
the `llvm::Value*` LHS parameter as a null pointer, not an integer zero.
Replace with `builder->CreateNeg(input)`, which emits `0 - input` with a proper
zero constant -- identical intended semantics, and clang-tidy clean.

Co-authored-by: Cursor <cursoragent@cursor.com>

---------

Co-authored-by: Robert Dazi <14996868+v01dXYZ@users.noreply.github.com>
Co-authored-by: v01dxyz <v01dxyz@v01d.xyz>
Co-authored-by: Hugh Perkins <hughperkins@gmail.com>
Co-authored-by: Alexis DUBURCQ <alexis.duburcq@gmail.com>
Co-authored-by: hugh <hugh@slurm-login-0.slurm-login.tenant-slurm.svc.cluster.local>
Co-authored-by: alanray-tech <alan.ray@genesis-ai.company>
Co-authored-by: alanray-tech <alanray-tech@users.noreply.github.com>
Co-authored-by: root <root@rtx-209-201.slurm-compute.tenant-slurm.svc.cluster.local>
Co-authored-by: Cursor <cursoragent@cursor.com>
Co-authored-by: Johnny <johnnynuca14@gmail.com>
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