Skip to content

Fix data bugs in literature and SVG Files #90

Description

@saraedum

some entries, e.g., https://github.com/echemdb/website/blob/main/literature/jovic_1999_cyclic_247/jovic_1999_cyclic_247_p3_4.yaml#L57 seem to be incomplete.

We should probably add some proper input validation with a schema if we think that schema is now mostly stable.


Fix the following issues in all files:
YAML

  • Components
    • Are the entries complete
    • Use commonly used names "HClO4" instead of "perchloric acid" unless it is a more complex organic molecule such as pyridine
    • Concentration available
    • In the field type use: acid, base, salt, solvent (replace alkaline with base)
  • Linked measurements should be nested as 'techniques` in source unless another measurement is directly linked to the shown CV
  • electrolyte concentration: Use mol / l as unit instead of M (only relevant for thos under revision)

SVG

Still under revision:

Already included literature

  • alves_2011_electrochemistry_6010
  • briega-martos_2021_cation_XXX
  • endo_1999_in-situ_19
  • engstfeld_2018_polycrystalline_17743
  • gomez-marin_2012_surface_558
  • hamad_2003_electrosorption_211
  • horswell_2004_a_10970
  • jovic_1999_cyclic_247
  • kerner_2002_measurement_2055
  • li_2000_chronocoulometric_95
  • nakamura_2011_structure_165433
  • nakamura_2014_structural_22136
  • pajkossy_1996_impedance_209
  • pajkossy_2001_double_3063
  • rehim_1998_electrochemical_1103
  • shi_1996_chloride_225
  • zei_1991_the_295

Batch fixing (when all files are merged)

  • YAML: Remove all comments (Except for that at the top of document - see below)
  • YAML: Remove all empty entries (recursively)
  • YAML: Add a comment at the very top that states:
    • This is part of the EchemDB.
    • Link to our homepage.
    • Link to example YAML. (ommited)
  • SVG: replace mV/s to mV / s
  • move comment and simultaneous measurement to SVG file
  • always include f in the filenames to designate the figure
  • Add https://doi.org/ to entry doi
  • Add https://www. to entry url
  • Add version: 1 to all yaml files.
  • Change DOI to URL
  • Remove figure description from YAML (these information are now included in the SVG)
  • Link curve with curve label in SVG where necessary when the following message appears during digitization with svgdigitizer image
  • Change source.bib to source.citation_key
  • Change curator to curation

Finalize

  • Batch Fix all issues
  • Fix doctests which include alves and engstfeld
  • Fix URL and DOI in cv_entry.md

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Fields

    No fields configured for issues without a type.

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions