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Nac workflow kb ref bug fix#315

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Yenaled merged 1 commit into
pachterlab:masterfrom
OakesC:master
May 19, 2026
Merged

Nac workflow kb ref bug fix#315
Yenaled merged 1 commit into
pachterlab:masterfrom
OakesC:master

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@OakesC

@OakesC OakesC commented May 12, 2026

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Fixed a NAC workflow bug where genes with no transcripts caused duplicate FASTA entries, corrupting the kallisto index and slowing bustools. The fix is ref.py.

Fixed a NAC workflow bug where genes with no transcripts caused duplicate FASTA entries, corrupting the kallisto index and slowing bustools. The fix is live in kb_python/ref.py; next step is running kb ref to verify.
@Yenaled Yenaled merged commit 1d930e8 into pachterlab:master May 19, 2026
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2 participants