T720A Project

This repository contains R scripts for RNA-seq analysis and quality control related to the T720A project.

Notes

All scripts are written in R (Rmd) and include step-by-step processing for RNA-seq datasets.
Please ensure required packages are installed before running the scripts.

Name		Name	Last commit message	Last commit date
Latest commit History 2 Commits
README.md		README.md
T720A filter low count genes summary statistics.R		T720A filter low count genes summary statistics.R
T720A_021225_dds.RDS		T720A_021225_dds.RDS
T720A_022425_CUT_ComBAT_dds_2.RDS		T720A_022425_CUT_ComBAT_dds_2.RDS
T720A_14_dds.RDS		T720A_14_dds.RDS
T720A_15_dds.RDS		T720A_15_dds.RDS
T720A_15_dds_1.RDS		T720A_15_dds_1.RDS
T720A_15_dds_cutoff_10.RDS		T720A_15_dds_cutoff_10.RDS
T720A_15_dds_cutoff_3.RDS		T720A_15_dds_cutoff_3.RDS
T720A_15_dds_cutoff_5.RDS		T720A_15_dds_cutoff_5.RDS
T720A_15_dds_cutoff_5_20.RDS		T720A_15_dds_cutoff_5_20.RDS
T720A_9_dds.RDS		T720A_9_dds.RDS
T720A_Report_100824_cutoff_10.Rmd		T720A_Report_100824_cutoff_10.Rmd
T720A_Report_100824_cutoff_3.Rmd		T720A_Report_100824_cutoff_3.Rmd
T720A_Report_100824_cutoff_5.Rmd		T720A_Report_100824_cutoff_5.Rmd
T720A_Report_100824_cutoff_5_20.Rmd		T720A_Report_100824_cutoff_5_20.Rmd
T720A_combined_all_dds.RDS		T720A_combined_all_dds.RDS
T720A_combined_all_dds1.RDS		T720A_combined_all_dds1.RDS
T720A_combined_all_dds2.RDS		T720A_combined_all_dds2.RDS
T720A_combined_all_dds3.RDS		T720A_combined_all_dds3.RDS
T720A_combined_all_dds4.RDS		T720A_combined_all_dds4.RDS
T720A_combined_dds.RDS		T720A_combined_dds.RDS