337 Add config tests#400
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yiheng-wang-nv merged 45 commits intoJun 2, 2023
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Signed-off-by: Yiheng Wang <vennw@nvidia.com>
Signed-off-by: Yiheng Wang <vennw@nvidia.com>
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for more information, see https://pre-commit.ci
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…o into add-config-tests
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todo: all test on evaluation, mgpu train, mgpu evaluation, inference, determinism train. |
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Fixes Project-MONAI#337 . ### Description This PR adds unit tests scripts, as well as test files on brats segmentation and spleen ct segmentation bundles. Tests are for both single GPU and multiple GPUs. In addition, the PR also enhances the current Blossom CI pipelines. For PRs that do not need to use GPU or multiple GPUs, the pipeline will not wait for resources first. ### Status **Ready** ### Please ensure all the checkboxes: <!--- Put an `x` in all the boxes that apply, and remove the not applicable items --> - [x] Codeformat tests passed locally by running `./runtests.sh --codeformat`. - [ ] In-line docstrings updated. - [ ] Update `version` and `changelog` in `metadata.json` if changing an existing bundle. - [ ] Please ensure the naming rules in config files meet our requirements (please refer to: `CONTRIBUTING.md`). - [ ] Ensure versions of packages such as `monai`, `pytorch` and `numpy` are correct in `metadata.json`. - [ ] Descriptions should be consistent with the content, such as `eval_metrics` of the provided weights and TorchScript modules. - [ ] Files larger than 25MB are excluded and replaced by providing download links in `large_file.yml`. - [ ] Avoid using path that contains personal information within config files (such as use `/home/your_name/` for `"bundle_root"`). --------- Signed-off-by: Yiheng Wang <vennw@nvidia.com> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
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Fixes #337 .
Description
This PR adds unit tests scripts, as well as test files on brats segmentation and spleen ct segmentation bundles. Tests are for both single GPU and multiple GPUs.
In addition, the PR also enhances the current Blossom CI pipelines. For PRs that do not need to use GPU or multiple GPUs, the pipeline will not wait for resources first.
Status
Ready
Please ensure all the checkboxes:
./runtests.sh --codeformat.versionandchangeloginmetadata.jsonif changing an existing bundle.CONTRIBUTING.md).monai,pytorchandnumpyare correct inmetadata.json.eval_metricsof the provided weights and TorchScript modules.large_file.yml./home/your_name/for"bundle_root").