Skip to content

3251 Add dependency check in WSIReader#3312

Merged
Nic-Ma merged 13 commits into
Project-MONAI:devfrom
Nic-Ma:3251-add-dep-check
Nov 12, 2021
Merged

3251 Add dependency check in WSIReader#3312
Nic-Ma merged 13 commits into
Project-MONAI:devfrom
Nic-Ma:3251-add-dep-check

Conversation

@Nic-Ma

@Nic-Ma Nic-Ma commented Nov 11, 2021

Copy link
Copy Markdown
Contributor

Fixes #3251 .

Description

This PR is follow up of #3251 to add the dependency check in WSIReader.

Status

Ready

Types of changes

  • Non-breaking change (fix or new feature that would not break existing functionality).
  • Breaking change (fix or new feature that would cause existing functionality to change).
  • New tests added to cover the changes.
  • Integration tests passed locally by running ./runtests.sh -f -u --net --coverage.
  • Quick tests passed locally by running ./runtests.sh --quick --unittests.
  • In-line docstrings updated.
  • Documentation updated, tested make html command in the docs/ folder.

@Nic-Ma

Nic-Ma commented Nov 11, 2021

Copy link
Copy Markdown
Contributor Author

/black

Signed-off-by: Nic Ma <nma@nvidia.com>
@Nic-Ma

Nic-Ma commented Nov 11, 2021

Copy link
Copy Markdown
Contributor Author

/black

@Nic-Ma

Nic-Ma commented Nov 11, 2021

Copy link
Copy Markdown
Contributor Author

/build

@Nic-Ma Nic-Ma changed the title [WIP] 3251 Add dependency check in WSIReader 3251 Add dependency check in WSIReader Nov 11, 2021
@Nic-Ma Nic-Ma marked this pull request as ready for review November 11, 2021 08:09
@Nic-Ma Nic-Ma mentioned this pull request Nov 11, 2021
5 tasks
Comment thread monai/data/image_reader.py Outdated
@Nic-Ma Nic-Ma requested a review from wyli November 11, 2021 17:54
@Nic-Ma

Nic-Ma commented Nov 11, 2021

Copy link
Copy Markdown
Contributor Author

/black

@Nic-Ma

Nic-Ma commented Nov 11, 2021

Copy link
Copy Markdown
Contributor Author

/build

@Nic-Ma Nic-Ma enabled auto-merge (squash) November 11, 2021 17:55

@wyli wyli left a comment

Copy link
Copy Markdown
Contributor

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Thanks, it looks good to me.

@Nic-Ma

Nic-Ma commented Nov 11, 2021

Copy link
Copy Markdown
Contributor Author

/build

@Nic-Ma

Nic-Ma commented Nov 11, 2021

Copy link
Copy Markdown
Contributor Author

/build

@Nic-Ma

Nic-Ma commented Nov 11, 2021

Copy link
Copy Markdown
Contributor Author

/build

@Nic-Ma

Nic-Ma commented Nov 12, 2021

Copy link
Copy Markdown
Contributor Author

/build

@Nic-Ma Nic-Ma merged commit 9837876 into Project-MONAI:dev Nov 12, 2021
bhashemian added a commit that referenced this pull request Nov 16, 2021
* 3251 Add dependency check in WSIReader (#3312)

* [DLMED] add dep check

Signed-off-by: Nic Ma <nma@nvidia.com>

* [DLMED] fix typo

Signed-off-by: Nic Ma <nma@nvidia.com>

* [DLMED] update according to comments

Signed-off-by: Nic Ma <nma@nvidia.com>
Signed-off-by: myron <amyronenko@nvidia.com>

* [DLMED] MILmodel  PR

Signed-off-by: myron <amyronenko@nvidia.com>

* small updates

Signed-off-by: myron <amyronenko@nvidia.com>

* fix jit issues

Signed-off-by: myron <amyronenko@nvidia.com>

* jit fix attempt

Signed-off-by: myron <amyronenko@nvidia.com>

* removing Enum

Signed-off-by: myron <amyronenko@nvidia.com>

Co-authored-by: Nic Ma <nma@nvidia.com>
Co-authored-by: Behrooz <3968947+drbeh@users.noreply.github.com>
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

tifffile support in WSIReader

3 participants