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2092 Enhance log for PNG with a flag #2094

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Merged
Nic-Ma merged 5 commits into from
Apr 27, 2021
Merged

2092 Enhance log for PNG with a flag #2094

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42a45e0
Merge pull request #19 from Project-MONAI/master
Nic-Ma Feb 1, 2021
cd16a13
Merge pull request #32 from Project-MONAI/master
Nic-Ma Feb 24, 2021
6036fff
Merge pull request #91 from Project-MONAI/master
Nic-Ma Apr 27, 2021
673d32e
[DLMED] add flag
Nic-Ma Apr 27, 2021
3799276
[DLMED] fix typo
Nic-Ma Apr 27, 2021
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7 changes: 6 additions & 1 deletion monai/data/nifti_saver.py
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Original file line number Diff line number Diff line change
Expand Up @@ -44,6 +44,7 @@ def __init__(
output_dtype: DtypeLike = np.float32,
squeeze_end_dims: bool = True,
data_root_dir: str = "",
print_log: bool = True,
) -> None:
"""
Args:
Expand Down Expand Up @@ -78,6 +79,7 @@ def __init__(
output_dir: /output,
data_root_dir: /foo/bar,
output will be: /output/test1/image/image_seg.nii.gz
print_log: whether to print log about the saved NIfTI file path, etc. default to `True`.

"""
self.output_dir = output_dir
Expand All @@ -92,6 +94,7 @@ def __init__(
self._data_index = 0
self.squeeze_end_dims = squeeze_end_dims
self.data_root_dir = data_root_dir
self.print_log = print_log

def save(self, data: Union[torch.Tensor, np.ndarray], meta_data: Optional[Dict] = None) -> None:
"""
Expand Down Expand Up @@ -153,7 +156,9 @@ def save(self, data: Union[torch.Tensor, np.ndarray], meta_data: Optional[Dict]
dtype=self.dtype,
output_dtype=self.output_dtype,
)
print(f"file written: {path}.")

if self.print_log:
print(f"file written: {path}.")

def save_batch(self, batch_data: Union[torch.Tensor, np.ndarray], meta_data: Optional[Dict] = None) -> None:
"""
Expand Down
6 changes: 6 additions & 0 deletions monai/data/png_saver.py
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Original file line number Diff line number Diff line change
Expand Up @@ -37,6 +37,7 @@ def __init__(
mode: Union[InterpolateMode, str] = InterpolateMode.NEAREST,
scale: Optional[int] = None,
data_root_dir: str = "",
print_log: bool = True,
) -> None:
"""
Args:
Expand All @@ -59,6 +60,7 @@ def __init__(
output_dir: /output,
data_root_dir: /foo/bar,
output will be: /output/test1/image/image_seg.png
print_log: whether to print log about the saved PNG file path, etc. default to `True`.

"""
self.output_dir = output_dir
Expand All @@ -68,6 +70,7 @@ def __init__(
self.mode: InterpolateMode = InterpolateMode(mode)
self.scale = scale
self.data_root_dir = data_root_dir
self.print_log = print_log

self._data_index = 0

Expand Down Expand Up @@ -122,6 +125,9 @@ def save(self, data: Union[torch.Tensor, np.ndarray], meta_data: Optional[Dict]
scale=self.scale,
)

if self.print_log:
print(f"file written: {path}.")

def save_batch(self, batch_data: Union[torch.Tensor, np.ndarray], meta_data: Optional[Dict] = None) -> None:
"""Save a batch of data into png format files.

Expand Down