Hardening/r shell coordination#58
Open
rkboyce wants to merge 18 commits into
Open
Conversation
…lls and the shared workflow runner
* R/slashOhdsiStrategusAssistant/R/strategus_cohort_methods_shell.R: C
| if path.endswith(".csv"): | ||
| import csv | ||
|
|
||
| with open(path, "r", encoding="utf-8") as handle: |
| raise IndexError(f"row_index_out_of_bounds:{row_index}") | ||
| return reader[idx] | ||
|
|
||
| with open(path, "r", encoding="utf-8") as handle: |
|
|
||
| def _load_keeper_concept_sets_from_path(path: str): | ||
| path = _resolve_safe_local_request_path(path) | ||
| with open(path, "r", encoding="utf-8") as handle: |
| if not protocol_text and protocol_path: | ||
| try: | ||
| with open(protocol_path, "r", encoding="utf-8") as handle: | ||
| with open(_resolve_safe_local_request_path(protocol_path), "r", encoding="utf-8") as handle: |
| for path in cohort_paths: | ||
| try: | ||
| with open(path, "r", encoding="utf-8") as handle: | ||
| with open(_resolve_safe_local_request_path(path), "r", encoding="utf-8") as handle: |
| if concept_set is None and concept_set_path: | ||
| try: | ||
| with open(concept_set_path, "r", encoding="utf-8") as handle: | ||
| with open(_resolve_safe_local_request_path(concept_set_path), "r", encoding="utf-8") as handle: |
| if (not cohort or cohort == {}) and cohort_path: | ||
| try: | ||
| with open(cohort_path, "r", encoding="utf-8") as handle: | ||
| with open(_resolve_safe_local_request_path(cohort_path), "r", encoding="utf-8") as handle: |
Updated video links in README to include 'VIDEO:' prefix for clarity.
Add 'VIDEO:' prefix to video links in README
Update video link for part 5 in README.md
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
2 participants
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Major revision to add runner and exploration features to the R shells that use Study Agent