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Niema Lab

8 followers
La Jolla, CA, USA
https://niema.net
https://orcid.org/0000-0003-2209-8128
@niema.net
niema@ucsd.edu

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Overview
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README.md

This GitHub Organization stores projects developed in my lab (I'm Niema Moshiri), either by students in the lab or through collaboration projects. For my own projects, see my GitHub account (niemasd).

GIF created using Stone KoKoro's tool

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ViralWasm ViralWasm Public

A client-side user-friendly web application suite for viral genomics.

JavaScript 5 1
Reference-Genomes Reference-Genomes Public

Preprocessed reference genomes for use with ViralMSA, ViralWasm, etc.

Python

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Showing 10 of 18 repositories

ViralWasm-Consensus Public
A client-side WebAssembly pipeline for viral consensus sequence calling

Niema-Lab/ViralWasm-Consensus’s past year of commit activity

JavaScript 1 GPL-3.0 1 1 0 Updated Jun 23, 2026
ViralWasm-Epi Public
A client-side WebAssembly pipeline for viral molecular epidemiology

Niema-Lab/ViralWasm-Epi’s past year of commit activity

JavaScript 5 GPL-3.0 1 1 0 Updated Jun 15, 2026
ViralWasm Public
A client-side user-friendly web application suite for viral genomics.

Niema-Lab/ViralWasm’s past year of commit activity

JavaScript 5 GPL-3.0 1 0 0 Updated Jun 15, 2026
Reference-Genomes Public
Preprocessed reference genomes for use with ViralMSA, ViralWasm, etc.

Niema-Lab/Reference-Genomes’s past year of commit activity

Python 0 GPL-3.0 0 1 0 Updated May 30, 2026
.github Public

Niema-Lab/.github’s past year of commit activity

0 0 0 0 Updated May 23, 2026
Game-Sales-Data Public
Reliable game sales data - arcade, computer, console, handheld

Niema-Lab/Game-Sales-Data’s past year of commit activity

Python 0 1 0 0 Updated Aug 22, 2025
Project-Bloom-Filter Public
Documentation, scripts, and data related to the Bloom Filter project

Niema-Lab/Project-Bloom-Filter’s past year of commit activity

Python 0 GPL-3.0 0 0 0 Updated May 7, 2025
Government-Wayback Public
Unofficial repository storing links to Wayback Machine for government pages

Niema-Lab/Government-Wayback’s past year of commit activity

Python 2 0 0 0 Updated Mar 2, 2025
sandbox-tutorials Public
WIP tutorials for sandbox.bio

Niema-Lab/sandbox-tutorials’s past year of commit activity

1 0 0 0 Updated Jan 10, 2025
Viral-Phylogenetics-Activity Public
Activity about viral phylogenetics, targeting K-12 students

Niema-Lab/Viral-Phylogenetics-Activity’s past year of commit activity

6 GPL-3.0 1 0 0 Updated Apr 8, 2024

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