Commented unnecesary import of pyham#72
Merged
sinamajidian merged 3 commits intoDessimozLab:minimap2from Sep 2, 2025
Merged
Conversation
Contributor
|
I'm wondering whether there is other occurrences that pyham is being used in read2tree - minimap2 branch? it seems to be only for reading orthoxml, which is already commented out. |
Contributor
Author
|
I've checked the code and didn't find any other occurrences. Maybe, just taking into account that when trying to access the instance attribute self._ham_analysis it will always be None (because of the _load_orthoxml method is commented out), but in any case that functionality is not used in this version. Just updated the python and conda library requirements |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
No description provided.