docs: Add Jupyter and helm readmes into public documentation

docs/docs/cogstack-ce/tutorial/end-to-end-jupyterhub.md

@@ -10,6 +10,11 @@ By the end, you will have completed an end-to-end user flow:
 4. Run cells that call MedCAT and AnonCAT service APIs
 5. Inspect the outputs
 
+!!! tip
+    The following tutorial will use your CogStack CE installation and let you run real code against your environment.
+
+    To see a non-interactive version of the tutorial notebook, refer to [the MedCAT Service Tutorial notebook](../../platform/cogstack-ai/medcat-service-tutorial.ipynb).
+
 ## Before you start
 
 Make sure your CogStack CE release is installed and local port-forwarding is running.

docs/mkdocs.yml

@@ -45,6 +45,8 @@ nav:
       - Natural Language Processing: overview/Natural Language Processing.md
       - MedCAT: https://docs.cogstack.org/projects/nlp
       - MedCAT Trainer: https://docs.cogstack.org/projects/medcat-trainer/
+      - Tutorials:
+        - Medcat Service Tutorial: platform/cogstack-ai/medcat-service-tutorial.ipynb
   - Data Engineering:
       - Data Engineering: data-engineering/index.md
       - Data pipelines: overview/Data pipelines.md
@@ -66,8 +68,7 @@ nav:
                   - Charts Overview: platform/deployment/helm/charts/_index.md
                   - MedCAT Service Helm: platform/deployment/helm/charts/medcat-service-helm.md
                   - MedCAT Trainer Helm: platform/deployment/helm/charts/medcat-trainer-helm.md
-              - CogStack CE:
-                  - Cogstack CE Helm: platform/deployment/helm/charts/cogstack-ce-helm.md
+                  - Cogstack CE Helm: platform/deployment/helm/charts/cogstack-helm-ce.md
           - Examples:
               - Examples: platform/deployment/examples/_index.md
               - AWS Kubernetes EKS: platform/deployment/examples/aws-kubernetes-eks.md
@@ -99,7 +100,13 @@ nav:
 
 plugins:
   - search
+  - gen-files:
+      scripts:
+        - scripts/gen_helm_readme.py
+        - scripts/copy_files_from_repo.py
   - termynal
+  - mkdocs-jupyter:
+      ignore_h1_titles: True
 
 extra:
   analytics:

docs/pyproject.toml

@@ -5,6 +5,8 @@ description = "CogStack Documentation"
 readme = "README.md"
 requires-python = ">=3.10"
 dependencies = [
+    "mkdocs-gen-files>=0.6.1",
+    "mkdocs-jupyter>=0.26.1",
     "mkdocs-material>=9.7.0",
     "termynal>=0.13.1",
 ]