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correct readme install #92

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Merged
MMathisLab merged 3 commits into from
Sep 9, 2024
Merged

correct readme install #92

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f14dbec
correct readme install
hausmanns Sep 8, 2024
6fd4793
Try to fix seed overflow in tests
C-Achard Sep 8, 2024
417451a
Update test_and_deploy.yml
MMathisLab Sep 9, 2024
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2 changes: 1 addition & 1 deletion .github/workflows/test_and_deploy.yml
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Expand Up @@ -22,7 +22,7 @@ jobs:
matrix:
# platform: [ubuntu-latest, windows-latest] # , macos-latest
platform: [ubuntu-latest]
python-version: ['3.8', '3.9', '3.10']
python-version: ['3.8', '3.9'] #issues with monai and 3.10; pausing for now. users should use python 3.9

steps:
- uses: actions/checkout@v3
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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -104,7 +104,7 @@ To avoid issues when installing on the ARM64 architecture, please follow these s

git clone https://github.com/AdaptiveMotorControlLab/CellSeg3d.git
cd CellSeg3d
conda env create -f conda/CellSeg3D_ARM64.yml
conda env create -f conda/napari_CellSeg3D_ARM64.yml
conda activate napari_CellSeg3D_ARM64


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3 changes: 3 additions & 0 deletions napari_cellseg3d/_tests/test_plugin_training.py
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@@ -1,5 +1,7 @@
from pathlib import Path

from monai.utils import set_determinism

from napari_cellseg3d import config
from napari_cellseg3d.code_plugins.plugin_model_training import (
Trainer,
Expand All @@ -11,6 +13,7 @@


def test_worker_configs(make_napari_viewer_proxy):
set_determinism(seed=0)
viewer = make_napari_viewer_proxy()
widget = Trainer(viewer=viewer)
# test supervised config and worker
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