Merge pull request #444 from stan-dev/dependabot/github_actions/codec… #796
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| on: | |
| push: | |
| branches: | |
| - main | |
| - master | |
| pull_request: | |
| branches: | |
| - main | |
| - master | |
| name: R-CMD-check | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: ${{ !startsWith(github.ref, 'refs/tags/') && github.ref != 'refs/heads/master' }} | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - { os: macOS-latest, r: "devel" } | |
| - { os: macOS-latest, r: "release" } | |
| - { os: windows-latest, r: "release" } | |
| - { os: ubuntu-latest, r: "devel" } | |
| - { os: ubuntu-latest, r: "release" } | |
| - { os: ubuntu-latest, r: "oldrel" } | |
| - { os: ubuntu-latest, r: "3.6" } | |
| env: | |
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - uses: actions/checkout@v6 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| http-user-agent: ${{ matrix.config.http-user-agent }} | |
| use-public-rspm: true | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - name: Remove randomForest from DESCRIPTION and examples for R 3.6 | |
| if: ${{ matrix.config.r == '3.6' }} | |
| run: | | |
| # Remove randomForest from DESCRIPTION | |
| desc_lines <- readLines("DESCRIPTION") | |
| desc_lines <- desc_lines[!grepl("randomForest", desc_lines)] | |
| writeLines(desc_lines, "DESCRIPTION") | |
| # Remove randomForest from rstar.Rd examples | |
| rd_file <- "man/rstar.Rd" | |
| rd_lines <- readLines(rd_file) | |
| # Find the examples section and remove randomForest requirement | |
| in_examples <- FALSE | |
| for (i in seq_along(rd_lines)) { | |
| if (grepl("^\\\\examples\\{", rd_lines[i])) { | |
| in_examples <- TRUE | |
| } | |
| if (in_examples && grepl("require\\(\"randomForest\"", rd_lines[i])) { | |
| rd_lines[i] <- gsub(" && require\\(\"randomForest\", quietly = TRUE\\)", "", rd_lines[i]) | |
| } | |
| if (in_examples && grepl("^\\}$", rd_lines[i])) { | |
| in_examples <- FALSE | |
| } | |
| } | |
| writeLines(rd_lines, rd_file) | |
| shell: Rscript {0} | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: any::rcmdcheck | |
| needs: check | |
| - name: Session info | |
| run: | | |
| options(width = 100) | |
| sessioninfo::session_info(installed.packages()[, "Package"], include_base = TRUE) | |
| shell: Rscript {0} | |
| - uses: r-lib/actions/check-r-package@v2 | |
| env: | |
| _R_CHECK_CRAN_INCOMING_: false | |
| with: | |
| args: 'c("--no-manual", "--as-cran")' | |
| - name: Show testthat output | |
| if: always() | |
| run: find check -name 'testthat.Rout*' -exec cat '{}' \; || true | |
| shell: bash | |
| - name: Upload check results | |
| if: failure() | |
| uses: actions/upload-artifact@v6 | |
| with: | |
| name: ${{ runner.os }}-r${{ matrix.config.r }}-results | |
| path: check |