Add unit tests for filename input handling across all workflow framew… #447
pipeline.yml
on: push
black
12s
pip_check
1m 2s
nfdi4ing
6m 52s
quantumespresso
33m 19s
arithmetic
2m 40s
documentation
36s
coverage
1m 25s
Matrix: unittest_matrix
Annotations
11 warnings
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black
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/checkout@v4. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
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pip_check
warning libmamba [galaxy-tool-util-models-26.0.0-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed
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unittest_matrix (ubuntu-latest, 3.11)
warning libmamba [galaxy-tool-util-models-26.0.0-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.11/site-packages/galaxy/__init__.py
- lib/python3.11/site-packages/galaxy/py.typed
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unittest_matrix (ubuntu-latest, 3.12)
warning libmamba [galaxy-tool-util-models-26.0.0-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed
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coverage
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/github-script@60a0d83039c74a4aee543508d2ffcb1c3799cdea. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
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coverage
warning libmamba [galaxy-tool-util-models-26.0.0-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed
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unittest_matrix (macos-latest, 3.12)
warning libmamba [galaxy-tool-util-models-26.0.0-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed
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arithmetic
warning libmamba [galaxy-tool-util-models-26.0.0-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed
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nfdi4ing
warning libmamba [galaxy-tool-util-models-26.0.0-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed
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quantumespresso
warning libmamba [optimade-1.2.3-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/tests/__init__.py
- lib/python3.12/site-packages/tests/conftest.py
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quantumespresso
warning libmamba [galaxy-tool-util-models-26.0.0-pyhd8ed1ab_0] The following files were already present in the environment:
- lib/python3.12/site-packages/galaxy/__init__.py
- lib/python3.12/site-packages/galaxy/py.typed
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