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Changelog

[1.2.6] - 2026-01-14

Added

Adds task cleanup-docker-images.

[1.2.5-docker29.0.1] - 2026-01-14

Docker

Updates Docker base image to pegi3s/docker:29.0.1 without modifying the source code.

[1.2.5] - 2024-09-19

Changed

Sets fixed versions for phipack (1.0.0) and omegamap (tag 2019.06.08).

[1.2.4] - 2023-06-22

Fixed

Add score_ascii to -output in t_coffee invocation of task align-protein-sequences.

[1.2.3] - 2022-08-02

Fixed

Fix run-mrbayes task to avoid failing when very long paths are used to locate the input files.

[1.2.2] - 2022-08-02

Fixed

Fix run-mrbayes task to avoid failing when very long paths are used to locate the input files.

[1.2.1] - 2021-07-13

Fixed

Fix run-mrbayes task so that it fails when the corresponding *.nex.con.tre file is not created.

[1.2.0] - 2021-04-28

Changed

Update Compi version to 1.4.0.

[1.1.0] - 2021-03-26

Changed

Fix check-input-files task to remove ambiguous sequences and exclude files.
Fix tabulate-results task to remove the correct results file at the beginning.
Update Compi version to 1.3.8.

[1.0.2] - 2020-12-22

Fixed

Fix regex in find error tasks script to avoid errors running ls.

[1.0.1] - 2020-11-11

Fixed

Fix OmegaMap results processing.

[1.0.0] - 2020-11-09

Added

First public release of the pipeline.