From b7c680a7287653118cf0b412b159eb91b676e269 Mon Sep 17 00:00:00 2001
From: yelenacox <yelena.cox@vumc.org>
Date: Wed, 8 Jul 2026 15:31:44 -0500
Subject: [PATCH] Clean up linter errors associated with full curies for
 enumerations

---
 .linkml-linter.yaml | 3 +++
 justfile            | 2 +-
 2 files changed, 4 insertions(+), 1 deletion(-)
 create mode 100644 .linkml-linter.yaml

diff --git a/.linkml-linter.yaml b/.linkml-linter.yaml
new file mode 100644
index 0000000..1dcffad
--- /dev/null
+++ b/.linkml-linter.yaml
@@ -0,0 +1,3 @@
+rules:
+  permissible_values_format:
+    format: '^[a-zA-Z0-9_\-:]+$'
diff --git a/justfile b/justfile
index 209e2f3..44ba479 100644
--- a/justfile
+++ b/justfile
@@ -94,7 +94,7 @@ test: _test-schema _test-python _test-examples
 # Run linting
 [group('model development')]
 lint:
-  uv run linkml-lint {{source_schema_dir}}
+  uv run linkml-lint --config .linkml-linter.yaml {{source_schema_dir}}
 
 # Generate md documentation for the schema
 [group('model development')]