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References

  1. Gasiunas G, Young JK, Karvelis T, Kazlauskas D, Urbaitis T, Jasnauskaite M, et al. A catalogue of biochemically diverse CRISPR-Cas9 orthologs. Nat Commun. 2020.
  2. Wei J, Hou L, Liu J, Wang Z, Gao S, Qi T, et al. Closely related type II-C Cas9 orthologs recognize diverse PAMs. Elife. 2022.
  3. Karvelis T, Gasiunas G, Young J, Bigelyte G, Silanskas A, Cigan M, et al. Rapid characterization of CRISPR-Cas9 protospacer adjacent motif sequence elements. Genome Biol. 2015.
  4. Liu Z, Chen S, Xie W, Yu H, Lai L, Li Z. Versatile and efficient genome editing with Neisseria cinerea Cas9. Communications Biology. 2022.
  5. Hand T, Das A, Li H. Directed evolution studies of a thermophilic Type II-C Cas9. Methods in Enzymology. Academic Press; 2019.
  6. Hirano H, Gootenberg JS, Horii T, Zhang F, Nishimasu H, Nureki O. Structure and Engineering of Francisella novicida Cas9. Cell. 2016.
  7. Cui Z, Tian R, Huang Z, Jin Z, Li L, Liu J, et al. FrCas9 is a CRISPR/Cas9 system with high editing efficiency and fidelity. Nat Commun. 2022.
  8. Kim E, Koo T, Park SW, Kim D, Kim K, Cho HY, et al. In vivo genome editing with a small Cas9 orthologue derived from Campylobacter jejuni. Nat Commun. 2017.
  9. Hirano S, Abudayyeh OO, Gootenberg JS, Horii T, Ishitani R, Hatada I, et al. Structural basis for the promiscuous PAM recognition by Corynebacterium diphtheriae Cas9. Nat Commun. 2019.
  10. Zetsche B, Gootenberg JS, Abudayyeh OO, Slaymaker IM, Makarova KS, Essletzbichler P, et al. Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system. Cell. 2015.
  11. Zetsche B, Abudayyeh OO, Gootenberg JS, Scott DA, Zhang F. A Survey of Genome Editing Activity for 16 Cas12a Orthologs. Keio J Med. 2020.
  12. Strecker J, Jones S, Koopal B, Schmid-Burgk J, Zetsche B, Gao L, et al. Engineering of CRISPR-Cas12b for human genome editing. Nat Commun. 2019.
  13. Harrington LB, Ma E, Chen JS, Witte IP, Gertz D, Paez-Espino D, et al. A scoutRNA Is Required for Some Type V CRISPR-Cas Systems. Mol Cell. 2020.
  14. Karvelis T, Bigelyte G, Young JK, Hou Z, Zedaveinyte R, Budre K, et al. PAM recognition by miniature CRISPR–Cas12f nucleases triggers programmable double-stranded DNA target cleavage. Nucleic Acids Res. 2020.
  15. Yan WX, Hunnewell P, Alfonse LE, Carte JM, Keston-Smith E, Sothiselvam S, et al. Functionally diverse type V CRISPR-Cas systems. Science. 2019.
  16. Wang Y, Qi T, Liu J, Yang Y, Wang Z, Wang Y, et al. A highly specific CRISPR-Cas12j nuclease enables allele-specific genome editing. Sci Adv. 2023.
  17. Strecker J, Ladha A, Gardner Z, Schmid-Burgk JL, Makarova KS, Koonin EV, et al. RNA-guided DNA insertion with CRISPR-associated transposases. Science. 2019.
  18. Urbaitis T, Gasiunas G, Young JK, Hou Z, Paulraj S, Godliauskaite E, et al. A new family of CRISPR-type V nucleases with C-rich PAM recognition. EMBO Rep. 2022.
  19. Wu WY, Mohanraju P, Liao C, Adiego-Pérez B, Creutzburg SCA, Makarova KS, et al. The miniature CRISPR-Cas12m effector binds DNA to block transcription. Mol Cell. 2022.
  20. Al-Shayeb B, Skopintsev P, Soczek KM, Stahl EC, Li Z, Groover E, et al. Diverse virus-encoded CRISPR-Cas systems include streamlined genome editors. Cell. 2022.
  21. Burstein D, Harrington L, Strutt S, Probst A, Anantharaman K, Thomas B, Doudna J, and Banfield J. New crispr–cas systems from uncultivated microbes. Nature 2017.