sierra-local/environment.yml at master · PoonLab/sierra-local · GitHub

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name: sierralocal
channels:
  - bioconda
  - defaults
dependencies:
  - _libgcc_mutex=0.1=main
  - _openmp_mutex=5.1=1_gnu
  - bzip2=1.0.8=h5eee18b_6
  - ca-certificates=2025.2.25=h06a4308_0
  - k8=0.2.5=h9a82719_1
  - ld_impl_linux-64=2.40=h12ee557_0
  - libffi=3.4.4=h6a678d5_1
  - libgcc-ng=11.2.0=h1234567_1
  - libgomp=11.2.0=h1234567_1
  - libstdcxx-ng=11.2.0=h1234567_1
  - libuuid=1.41.5=h5eee18b_0
  - minimap2=2.22=h5bf99c6_0
  - ncurses=6.4=h6a678d5_0
  - openssl=3.0.16=h5eee18b_0
  - pip=25.1=pyhc872135_2
  - python=3.10.16=he870216_1
  - readline=8.2=h5eee18b_0
  - setuptools=78.1.1=py310h06a4308_0
  - sqlite=3.45.3=h5eee18b_0
  - tk=8.6.14=h39e8969_0
  - tzdata=2025b=h04d1e81_0
  - wheel=0.45.1=py310h06a4308_0
  - xz=5.6.4=h5eee18b_1
  - zlib=1.2.13=h5eee18b_1
  - pip:
      - click==8.1.3
      - cython==0.29.35
      - more-itertools==9.1.0
      - orjson==3.9.1
      - pafpy==0.2.0
      - post-align @ https://github.com/hivdb/post-align/archive/8e2ee118261987208c17add6cef5c1270e325a4c.zip
      - types-setuptools==67.8.0.0
prefix: /home/will/miniconda3/envs/sierralocal