dsims/DESCRIPTION at master · DistanceDevelopment/dsims · GitHub

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Package: dsims
Depends:
    dssd (>= 0.2.2)
Imports:
    mrds,
    Distance,
    sf,
    ggplot2,
    purrr,
    dplyr,
    mgcv,
    methods,
    rstudioapi,
    gridExtra,
    rlang
Suggests:
    testthat,
    bookdown,
    parallel,
    pbapply,
    knitr,
    lwgeom,
    rmarkdown
Type: Package
Title: Distance Sampling Simulations
Version: 1.0.6
Authors@R: c(
  person("Laura", "Marshall", email = "lhm@st-and.ac.uk", role = c("aut", "cre")),
  person("Thomas", "Len", email = "len.thomas@st-andrews.ac.uk", role = "ctb"))
Maintainer: Laura Marshall <lhm@st-and.ac.uk>
Description: Performs distance sampling simulations. 'dsims' repeatedly generates
    instances of a user defined population within a given survey region. It then
    generates realisations of a survey design and simulates the detection process.
    The data are then analysed so that the results can be compared for accuracy
    and precision across all replications. This process allows users to optimise
    survey designs for their specific set of survey conditions. The effects of
    uncertainty in population distribution or parameters can be investigated
    under a number of simulations so that users can be confident that they have
    achieved a robust survey design before deploying vessels into the field. The
    distance sampling designs used in this package from 'dssd' are detailed in
    Chapter 7 of Advanced Distance Sampling, Buckland et. al. (2008, ISBN-13:
    978-0199225873). General distance sampling methods are detailed in Introduction
    to Distance Sampling: Estimating Abundance of Biological Populations, Buckland
    et. al. (2004, ISBN-13: 978-0198509271). Find out more about estimating
    animal/plant abundance with distance sampling at <https://distancesampling.org/>.
License: GPL (>=2)
Language: en-GB
URL: https://github.com/DistanceDevelopment/dsims
BugReports: https://github.com/DistanceDevelopment/dsims/issues
Encoding: UTF-8
RoxygenNote: 7.3.2
Collate:
    'AICc.R'
    'generic.functions.R'
    'Density.Summary.R'
    'Density.R'
    'Population.Description.R'
    'Detectability.R'
    'Population.R'
    'Survey.R'
    'DS.Analysis.R'
    'Simulation.R'
    'ClassConstructors.R'
    'Simulation.Summary.R'
    'Survey.LT.R'
    'Survey.PT.R'
    'accumulate.PP.results.R'
    'accumulate.warnings.R'
    'add.covariate.values.R'
    'add.summary.results.R'
    'calc.perp.dists.R'
    'calc.rad.dists.R'
    'calculate.scale.param.R'
    'check.covariates.R'
    'check.simulation.R'
    'check.transects.R'
    'create.results.arrays.R'
    'description.summary.R'
    'dsims-package.R'
    'generate.pop.D.R'
    'generate.pop.N.R'
    'get.covered.area.lines.R'
    'get.covered.area.points.R'
    'get.density.surface.R'
    'message.handler.R'
    'modify.strata.for.analysis.R'
    'process.dist.shapes.R'
    'read.line.transects.R'
    'read.point.transects.R'
    'read.seg.transects.R'
    'run.simulation.R'
    'rztpois.R'
    'save.sim.results.R'
    'simulate.detections.R'
    'simulation.consistency.check.R'
    'single.sim.loop.R'
    'store.ddf.results.R'
    'store.dht.results.R'