From 6fb1fcf949e08445934c26932bda3c5c71947a0c Mon Sep 17 00:00:00 2001
From: C-Achard <cyril.achard@epfl.ch>
Date: Thu, 30 Jun 2022 11:39:15 +0200
Subject: [PATCH 1/3] Various fixes

- Fixed setup.cfg typo
- Added missing init.py in download parameters for pypi packaging
- Updated MONAI for SwinUNETR
---
 napari_cellseg3d/models/pretrained/__init__.py | 0
 requirements.txt                               | 6 +++---
 setup.cfg                                      | 8 ++++----
 3 files changed, 7 insertions(+), 7 deletions(-)
 create mode 100644 napari_cellseg3d/models/pretrained/__init__.py

diff --git a/napari_cellseg3d/models/pretrained/__init__.py b/napari_cellseg3d/models/pretrained/__init__.py
new file mode 100644
index 00000000..e69de29b
diff --git a/requirements.txt b/requirements.txt
index 93df2f28..b7f72add 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -17,9 +17,9 @@ scikit-image>=0.19.2
 matplotlib>=3.4.1
 tifffile>=2022.2.9
 imageio-ffmpeg>=0.4.5
-torch==1.11
-monai==0.8.1
+torch>=1.11
+monai>=0.8.1
 nibabel
 pillow
-itk==5.2.0.post1
+itk>=5.2.0.post1
 vispy>=0.9.6
diff --git a/setup.cfg b/setup.cfg
index 771325d3..ce851c25 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -49,16 +49,16 @@ install_requires =
     matplotlib>=3.4.1
     tifffile>=2022.2.9
     imageio-ffmpeg>=0.4.5
-    torch==1.11
-    monai==0.8.1
+    torch>=1.11
+    monai>=0.8.1
     nibabel
     scikit-image
     pillow
-    itk==5.2.0.post1
+    itk>=5.2.0.post1
     matplotlib
     vispy>=0.9.6
 
-[optiadd .ons.packages.find]
+[options.packages.find]
 where = .
 
 [options.package_data]

From 590f83cf016ece768c7a4cd7fe9e9051fef8609c Mon Sep 17 00:00:00 2001
From: Cyril Achard <94955160+C-Achard@users.noreply.github.com>
Date: Thu, 30 Jun 2022 11:47:25 +0200
Subject: [PATCH 2/3] Update setup.cfg

---
 setup.cfg | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/setup.cfg b/setup.cfg
index ce851c25..e3810bf9 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -50,7 +50,7 @@ install_requires =
     tifffile>=2022.2.9
     imageio-ffmpeg>=0.4.5
     torch>=1.11
-    monai>=0.8.1
+    monai>=0.9.0
     nibabel
     scikit-image
     pillow

From c3bc86ea69bcae3a82580446ce557777381b208d Mon Sep 17 00:00:00 2001
From: Cyril Achard <94955160+C-Achard@users.noreply.github.com>
Date: Thu, 30 Jun 2022 11:48:33 +0200
Subject: [PATCH 3/3] Update requirements.txt

---
 requirements.txt | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/requirements.txt b/requirements.txt
index b7f72add..6643bf48 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -18,7 +18,7 @@ matplotlib>=3.4.1
 tifffile>=2022.2.9
 imageio-ffmpeg>=0.4.5
 torch>=1.11
-monai>=0.8.1
+monai>=0.9.0
 nibabel
 pillow
 itk>=5.2.0.post1